Useful functions for plotting

class atomsmltr.utils.plotter.tools.Annotation3D(text, xyz, *args, **kwargs)

Bases: Annotation

draw(renderer)

Draw the Artist (and its children) using the given renderer.

This has no effect if the artist is not visible (.Artist.get_visible returns False).

Parameters:

renderer (~matplotlib.backend_bases.RendererBase subclass.)

Notes

This method is overridden in the Artist subclasses.

set(*, agg_filter=<UNSET>, alpha=<UNSET>, animated=<UNSET>, anncoords=<UNSET>, annotation_clip=<UNSET>, antialiased=<UNSET>, backgroundcolor=<UNSET>, bbox=<UNSET>, clip_box=<UNSET>, clip_on=<UNSET>, clip_path=<UNSET>, color=<UNSET>, fontfamily=<UNSET>, fontproperties=<UNSET>, fontsize=<UNSET>, fontstretch=<UNSET>, fontstyle=<UNSET>, fontvariant=<UNSET>, fontweight=<UNSET>, gid=<UNSET>, horizontalalignment=<UNSET>, in_layout=<UNSET>, label=<UNSET>, linespacing=<UNSET>, math_fontfamily=<UNSET>, mouseover=<UNSET>, multialignment=<UNSET>, parse_math=<UNSET>, path_effects=<UNSET>, picker=<UNSET>, position=<UNSET>, rasterized=<UNSET>, rotation=<UNSET>, rotation_mode=<UNSET>, sketch_params=<UNSET>, snap=<UNSET>, text=<UNSET>, transform=<UNSET>, transform_rotates_text=<UNSET>, url=<UNSET>, usetex=<UNSET>, verticalalignment=<UNSET>, visible=<UNSET>, wrap=<UNSET>, x=<UNSET>, y=<UNSET>, zorder=<UNSET>)

Set multiple properties at once.

Supported properties are

Properties:

agg_filter: a filter function, which takes a (m, n, 3) float array and a dpi value, and returns a (m, n, 3) array and two offsets from the bottom left corner of the image alpha: scalar or None animated: bool anncoords: unknown annotation_clip: bool or None antialiased: bool backgroundcolor: :mpltype:`color` bbox: dict with properties for .patches.FancyBboxPatch clip_box: ~matplotlib.transforms.BboxBase or None clip_on: bool clip_path: Patch or (Path, Transform) or None color or c: :mpltype:`color` figure: ~matplotlib.figure.Figure or ~matplotlib.figure.SubFigure fontfamily or family or fontname: {FONTNAME, ‘serif’, ‘sans-serif’, ‘cursive’, ‘fantasy’, ‘monospace’} fontproperties or font or font_properties: .font_manager.FontProperties or str or pathlib.Path fontsize or size: float or {‘xx-small’, ‘x-small’, ‘small’, ‘medium’, ‘large’, ‘x-large’, ‘xx-large’} fontstretch or stretch: {a numeric value in range 0-1000, ‘ultra-condensed’, ‘extra-condensed’, ‘condensed’, ‘semi-condensed’, ‘normal’, ‘semi-expanded’, ‘expanded’, ‘extra-expanded’, ‘ultra-expanded’} fontstyle or style: {‘normal’, ‘italic’, ‘oblique’} fontvariant or variant: {‘normal’, ‘small-caps’} fontweight or weight: {a numeric value in range 0-1000, ‘ultralight’, ‘light’, ‘normal’, ‘regular’, ‘book’, ‘medium’, ‘roman’, ‘semibold’, ‘demibold’, ‘demi’, ‘bold’, ‘heavy’, ‘extra bold’, ‘black’} gid: str horizontalalignment or ha: {‘left’, ‘center’, ‘right’} in_layout: bool label: object linespacing: float (multiple of font size) math_fontfamily: str mouseover: bool multialignment or ma: {‘left’, ‘right’, ‘center’} parse_math: bool path_effects: list of .AbstractPathEffect picker: None or bool or float or callable position: (float, float) rasterized: bool rotation: float or {‘vertical’, ‘horizontal’} rotation_mode: {None, ‘default’, ‘anchor’} sketch_params: (scale: float, length: float, randomness: float) snap: bool or None text: object transform: ~matplotlib.transforms.Transform transform_rotates_text: bool url: str usetex: bool, default: :rc:`text.usetex` verticalalignment or va: {‘baseline’, ‘bottom’, ‘center’, ‘center_baseline’, ‘top’} visible: bool wrap: bool x: float y: float zorder: float

class atomsmltr.utils.plotter.tools.Arrow3D(x, y, z, dx, dy, dz, *args, **kwargs)

Bases: FancyArrowPatch

draw(renderer)

Draw the Artist (and its children) using the given renderer.

This has no effect if the artist is not visible (.Artist.get_visible returns False).

Parameters:

renderer (~matplotlib.backend_bases.RendererBase subclass.)

Notes

This method is overridden in the Artist subclasses.

set(*, agg_filter=<UNSET>, alpha=<UNSET>, animated=<UNSET>, antialiased=<UNSET>, arrowstyle=<UNSET>, capstyle=<UNSET>, clip_box=<UNSET>, clip_on=<UNSET>, clip_path=<UNSET>, color=<UNSET>, connectionstyle=<UNSET>, edgecolor=<UNSET>, facecolor=<UNSET>, fill=<UNSET>, gid=<UNSET>, hatch=<UNSET>, hatch_linewidth=<UNSET>, in_layout=<UNSET>, joinstyle=<UNSET>, label=<UNSET>, linestyle=<UNSET>, linewidth=<UNSET>, mouseover=<UNSET>, mutation_aspect=<UNSET>, mutation_scale=<UNSET>, patchA=<UNSET>, patchB=<UNSET>, path_effects=<UNSET>, picker=<UNSET>, positions=<UNSET>, rasterized=<UNSET>, sketch_params=<UNSET>, snap=<UNSET>, transform=<UNSET>, url=<UNSET>, visible=<UNSET>, zorder=<UNSET>)

Set multiple properties at once.

Supported properties are

Properties:

agg_filter: a filter function, which takes a (m, n, 3) float array and a dpi value, and returns a (m, n, 3) array and two offsets from the bottom left corner of the image alpha: scalar or None animated: bool antialiased or aa: bool or None arrowstyle: [ ‘-’ | ‘<-’ | ‘->’ | ‘<->’ | ‘<|-' | '-|>’ | ‘<|-|>’ | ‘]-’ | ‘-[’ | ‘]-[’ | ‘|-|’ | ‘]->’ | ‘<-[’ | ‘simple’ | ‘fancy’ | ‘wedge’ ] capstyle: .CapStyle or {‘butt’, ‘projecting’, ‘round’} clip_box: ~matplotlib.transforms.BboxBase or None clip_on: bool clip_path: Patch or (Path, Transform) or None color: :mpltype:`color` connectionstyle: [ ‘arc3’ | ‘angle3’ | ‘angle’ | ‘arc’ | ‘bar’ ] edgecolor or ec: :mpltype:`color` or None facecolor or fc: :mpltype:`color` or None figure: ~matplotlib.figure.Figure or ~matplotlib.figure.SubFigure fill: bool gid: str hatch: {‘/’, ‘\’, ‘|’, ‘-’, ‘+’, ‘x’, ‘o’, ‘O’, ‘.’, ‘*’} hatch_linewidth: unknown in_layout: bool joinstyle: .JoinStyle or {‘miter’, ‘round’, ‘bevel’} label: object linestyle or ls: {‘-’, ‘–’, ‘-.’, ‘:’, ‘’, (offset, on-off-seq), …} linewidth or lw: float or None mouseover: bool mutation_aspect: float mutation_scale: float patchA: .patches.Patch patchB: .patches.Patch path_effects: list of .AbstractPathEffect picker: None or bool or float or callable positions: unknown rasterized: bool sketch_params: (scale: float, length: float, randomness: float) snap: bool or None transform: ~matplotlib.transforms.Transform url: str visible: bool zorder: float